#include <CGAL/Exact_predicates_inexact_constructions_kernel.h>

#include <CGAL/Mesh_triangulation_3.h>
#include <CGAL/Mesh_complex_3_in_triangulation_3.h>
#include <CGAL/Mesh_criteria_3.h>
#include <CGAL/Mesh_constant_domain_field_3.h>

#include <CGAL/Labeled_image_mesh_domain_3.h>
#include <CGAL/make_mesh_3.h>
#include <CGAL/Image_3.h>

// Domain
typedef CGAL::Exact_predicates_inexact_constructions_kernel K;
typedef CGAL::Labeled_image_mesh_domain_3<CGAL::Image_3,K> Mesh_domain;

// Triangulation
typedef CGAL::Mesh_triangulation_3<Mesh_domain>::type Tr;
typedef CGAL::Mesh_complex_3_in_triangulation_3<Tr> C3t3;

// Criteria
typedef CGAL::Mesh_criteria_3<Tr> Mesh_criteria;
typedef CGAL::Mesh_constant_domain_field_3<Mesh_domain::R,
                                           Mesh_domain::Index> Sizing_field;

// To avoid verbose function and named parameters call
using namespace CGAL::parameters;

int main()
{
  // Loads image
  CGAL::Image_3 image;
  image.read("data/liver.inr.gz");

  // Domain
  Mesh_domain domain(image);

  // Sizing field: set global size to 8 and kidney size (label 127) to 3
  double kidney_size = 3.;
  int volume_dimension = 3;
  Sizing_field size(8);
  size.set_size(kidney_size, volume_dimension, 
                domain.index_from_subdomain_index(127));
  
  // Mesh criteria
  Mesh_criteria criteria(facet_angle=30, facet_size=6, facet_distance=2,
                         cell_radius_edge_ratio=3, cell_size=size);

  // Meshing
  C3t3 c3t3 = CGAL::make_mesh_3<C3t3>(domain, criteria);

  // Output
  std::ofstream medit_file("out.mesh");
  c3t3.output_to_medit(medit_file);

  return 0;
}